Software for data-analysis

The following tools are among the software currently available in NeuroFedora:

brain2mesh

sudo dnf install octave-brain2mesh

A fully automated high-quality brain tetrahedral mesh generation toolbox.

efel

sudo dnf install python3-efel

Electrophys Feature Extraction Library.

elephant

sudo dnf install python3-elephant

A package for analysis of electrophysiology data in Python.

iso2mesh

sudo dnf install octave-iso2mesh

A medical-image based 3-D mesh generation and analysis toolkit.

mne

sudo dnf install python3-mne

Magnetoencephalography (MEG) and Electroencephalography (EEG) data analysis.

mcxlab

sudo dnf install octave-mcxlab

A 3-D Monte Carlo photon transport simulation toolbox.

neurodsp

sudo dnf install python3-neurodsp

A Python package to analyze and simulate neural time series, using digital signal processing.

neurosynth

sudo dnf install python3-neurosynth

Large-scale synthesis of functional neuroimaging data.

nitime

sudo dnf install python3-nitime

Timeseries analysis for neuroscience data.

openmeeg

sudo dnf install openmeeg

A C++ package for solving the forward problems of electroencephalography (EEG) and magnetoencephalography (MEG).

pyelectro

sudo dnf install python3-pyelectro

A library for analysis of electrophysiological data.

pynwb

sudo dnf install python3-pynwb

A Python package for working with NWB files.

Software that is in the queue for inclusion is listed here.